Classification of cortical microcircuits based on micro-electrode-array data from slices of rat barrel cortex.
Fulltext:
75307.pdf
Embargo:
until further notice
Size:
5.393Mb
Format:
PDF
Description:
Publisher’s version
Publication year
2009Source
Neural Networks, 22, 8, (2009), pp. 1159-68ISSN
Publication type
Article / Letter to editor
Display more detailsDisplay less details
Organization
Cognitive Neuroscience
Neurophysiology
Former Organization
Medical Physics and Biophysics
Journal title
Neural Networks
Volume
vol. 22
Issue
iss. 8
Page start
p. 1159
Page end
p. 68
Subject
DCN 1: Perception and Action; DCN 3: Neuroinformatics; NCMLS 5: Membrane transport and intracellular motilityAbstract
The bewildering complexity of cortical microcircuits at the single cell level gives rise to surprisingly robust emergent activity patterns at the level of laminar and columnar local field potentials (LFPs) in response to targeted local stimuli. Here we report the results of our multivariate data-analytic approach based on simultaneous multi-site recordings using micro-electrode-array chips for investigation of the microcircuitry of rat somatosensory (barrel) cortex. We find high repeatability of stimulus-induced responses, and typical spatial distributions of LFP responses to stimuli in supragranular, granular, and infragranular layers, where the last form a particularly distinct class. Population spikes appear to travel with about 33 cm/s from granular to infragranular layers. Responses within barrel related columns have different profiles than those in neighbouring columns to the left or interchangeably to the right. Variations between slices occur, but can be minimized by strictly obeying controlled experimental protocols. Cluster analysis on normalized recordings indicates specific spatial distributions of time series reflecting the location of sources and sinks independent of the stimulus layer. Although the precise correspondences between single cell activity and LFPs are still far from clear, a sophisticated neuroinformatics approach in combination with multi-site LFP recordings in the standardized slice preparation is suitable for comparing normal conditions to genetically or pharmacologically altered situations based on real cortical microcircuitry.
This item appears in the following Collection(s)
- Academic publications [246764]
- Electronic publications [134241]
- Faculty of Medical Sciences [93461]
- Faculty of Science [38035]
Upload full text
Use your RU credentials (u/z-number and password) to log in with SURFconext to upload a file for processing by the repository team.