Cavity approximation for graphical models.
Publication year
2007Source
Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics, 76, 1 Pt 1, (2007), pp. 011102-1-011102ISSN
Publication type
Article / Letter to editor

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Organization
Cognitive Neuroscience
Biophysics
Former Organization
Medical Physics and Biophysics
Journal title
Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics
Volume
vol. 76
Issue
iss. 1 Pt 1
Page start
p. 011102-1
Page end
p. 011102
Subject
Biophysics; DCN 3: Neuroinformatics; UMCN 3.2: Cognitive neurosciencesAbstract
We reformulate the cavity approximation (CA), a class of algorithms recently introduced for improving the Bethe approximation estimates of marginals in graphical models. In our formulation, which allows for the treatment of multivalued variables, a further generalization to factor graphs with arbitrary order of interaction factors is explicitly carried out, and a message passing algorithm that implements the first order correction to the Bethe approximation is described. Furthermore, we investigate an implementation of the CA for pairwise interactions. In all cases considered we could confirm that CA[k] with increasing k provides a sequence of approximations of markedly increasing precision. Furthermore, in some cases we could also confirm the general expectation that the approximation of order k , whose computational complexity is O(N(k+1)) has an error that scales as 1/N(k+1) with the size of the system. We discuss the relation between this approach and some recent developments in the field.
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- Academic publications [232036]
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- Faculty of Medical Sciences [89029]
- Faculty of Science [34950]
- Open Access publications [82630]
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