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      Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions

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      Creators
      Bayer, B.
      Saito, M.A.
      McIlvin, M.R.
      Lücker, S.
      Moran, D.M.
      Lankiewicz, T.S.
      Dupont, C.L.
      Santoro, A.E.
      Date of Archiving
      2021
      Archive
      PRIDE
      Related links
      https://www.ebi.ac.uk/pride/archive/projects/PXD021606
      Related publications
      Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions  
      Publication type
      Dataset
      Access level
      Open access
      Please use this identifier to cite or link to this item: https://hdl.handle.net/2066/239479   https://hdl.handle.net/2066/239479
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      Organization
      Ecological Microbiology
      Audience(s)
      Biology
      Key words
      Nitrospira marina; metabolism
      Abstract
      In this study, we investigated the metabolic potential of N. marina based on its complete genome sequence and performed physiological experiments to test genome-derived hypotheses. Our data confirm that N. marina benefits from additions of undefined organic carbon substrates, has adaptations to resist oxidative, osmotic and UV light-induced stress and low dissolved pCO2. Additionally, N. marina is able to grow chemoorganotrophically on formate, and is thus not an obligate chemolithoautotroph. We further investigated the metabolic response of N. marina to low (5.6 µM) O2 concentrations. In response to O2-limited conditions, the abundance of a potentially more efficient CO2-fixing pyruvate:ferredoxin oxidoreductase (POR) complex and a high-affinity cbb3-type terminal oxidase increased, suggesting a role in sustaining nitrite oxidation-driven autotrophy under O2 limitation.
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      • Datasets [1282]
      • Faculty of Science [32345]
       
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