Hand classification of fMRI ICA noise components
Publication year
2017Source
NeuroImage, 154, (2017), pp. 188-205ISSN
Publication type
Article / Letter to editor
Display more detailsDisplay less details
Organization
PI Group Statistical Imaging Neuroscience
Cognitive Neuroscience
Journal title
NeuroImage
Volume
vol. 154
Page start
p. 188
Page end
p. 205
Subject
220 Statistical Imaging Neuroscience; Radboudumc 13: Stress-related disorders DCMN: Donders Center for Medical Neuroscience; Radboudumc 7: Neurodevelopmental disorders DCMN: Donders Center for Medical Neuroscience; Cognitive Neuroscience - Radboud University Medical CenterAbstract
We present a practical "how-to" guide to help determine whether single-subject fMRI independent components (ICs) characterise structured noise or not. Manual identification of signal and noise after ICA decomposition is required for efficient data denoising: to train supervised algorithms, to check the results of unsupervised ones or to manually clean the data. In this paper we describe the main spatial and temporal features of ICs and provide general guidelines on how to evaluate these. Examples of signal and noise components are provided from a wide range of datasets (3T data, including examples from the UK Biobank and the Human Connectome Project, and 7T data), together with practical guidelines for their identification. Finally, we discuss how the data quality, data type and preprocessing can influence the characteristics of the ICs and present examples of particularly challenging datasets.
This item appears in the following Collection(s)
- Academic publications [243984]
- Donders Centre for Cognitive Neuroimaging [3983]
- Electronic publications [130695]
- Faculty of Medical Sciences [92811]
- Open Access publications [104973]
Upload full text
Use your RU credentials (u/z-number and password) to log in with SURFconext to upload a file for processing by the repository team.