Browsing by Author "Oomens, J."

High-resolution IR absorption spectroscopy of polycyclic aromatic hydrocarbons in the 3 mu m region: role of hydrogenation and alkylation

Maltseva, E.; Mackie, C.J.; Candian, A.; Petrignani, Annemieke ; Huang, X.; Lee, Timothy J.; Oomens, J. ; Buma, Wybren Jan

2018, Article / Letter to editor (Astronomy and Astrophysics, vol. 610, (2018), pp. 1-9, article A65)

Unimolecular Fragmentation of Deprotonated Diproline [Pro(2)-H](-) Studied by Chemical Dynamics Simulations and IRMPD Spectroscopy

Martin-Somer, Ana; Martens, J.K.; Grzetic, Josipa; Hase, William L.; Oomens, J. ; Spezia, R.

2018, Article / Letter to editor (The Journal of Physical Chemistry A, vol. 122, iss. 10, (2018), pp. 2612-2625)

Uranyl/12-crown-4 Ether Complexes and Derivatives: Structural Characterization and Isomeric Differentiation

Jian, Jiwen; Hu, Shu-Xian; Li, Wan-Lu; Stipdonk, M.J. Van; Martens, J.K.; Berden, G. ; Oomens, J. ; Li, Jun; Gibson, J.K.

2018, Article / Letter to editor (Inorganic Chemistry, vol. 57, iss. 7, (2018), pp. 4125-4134)

Intra-cavity proton bonding and anharmonicity in the anionophore cyclen

Ramon Aviles-Moreno, Juan; Berden, G. ; Oomens, J. ; Martinez-Haya, B.

2018, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 20, iss. 13, (2018), pp. 8968-8975)

Guanidinium/ammonium competition and proton transfer in the interaction of the amino acid arginine with the tetracarboxylic 18-crown-6 ionophore

Ramon Aviles-Moreno, Juan; Berden, G. ; Oomens, J. ; Martinez-Haya, B.

2018, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 20, iss. 6, (2018), pp. 4067-4073)

Conformations of Protonated AlaDap and DapAla Characterized by IRMPD Spectroscopy and Molecular Modeling

Batoon, Patrick; Oomens, J. ; Berden, G. ; Ren, Jianhua

2018, Article / Letter to editor (Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, vol. 122, iss. 8, (2018), pp. 2191-2202)

Equatorial coordination of uranyl: Correlating ligand charge donation with the O-yl-U-O-yl asymmetric stretch frequency

Gibson, J.K.; Jong, Wibe A. de; Stipdonk, M.J. Van; Martens, J.K.; Berden, G. ; Oomens, J.

2018, Article / Letter to editor (Journal of Organometallic Chemistry, vol. 857, (2018), pp. 94-100)

Deamidation of Protonated Asparagine-Valine Investigated by a Combined Spectroscopic, Guided Ion Beam, and Theoretical Study

Kempkes, L.J.M.; Boles, G.C.; Martens, J.K.; Berden, G. ; Armentrout, P.B.; Oomens, J.

2018, Article / Letter to editor (The Journal of Physical Chemistry A, vol. 122, iss. 9, (2018), pp. 2424-2436)

Experimental and Theoretical Investigations of Infrared Multiple Photon Dissociation Spectra of Aspartic Acid Complexes with Zn2+ and Cd2+

Boles, G.C.; Hightower, Randy L.; Coates, R.A.; McNary, C.P.; Berden, G. ; Oomens, J. ; Armentrout, P.B.

2018, Article / Letter to editor (Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, vol. 122, iss. 14, (2018), pp. 3836-3853)

Infrared multiple photon dissociation spectroscopy of cationized canavanine: Side-chain substitution influences gas-phase zwitterion formation

Smith, Zachary M.; Steinmetz, V.; Martens, J.K.; Oomens, J. ; Poutsma, J.C.

2018, Article / Letter to editor (International Journal of Mass Spectrometry, vol. 429, (2018), pp. 158-173)

Gas phase vibrations of an anionic, hydrogen-bonded homodimer of a nucleobase analogue: Isocytosino-8-trifluoromethylquinolone

Bendo, J.A.; Martens, J.K.; Berden, G. ; Oomens, J. ; Morton, T.H.

2018, Article / Letter to editor (International Journal of Mass Spectrometry, vol. 429, (2018), pp. 206-211)

An Unprecedented Retro-Mumm Rearrangement Revealed by ESI-MS/MS, IRMPD Spectroscopy, and DFT Calculations

Iacobucci, Claudio; Reale, Samantha; Aschi, Massimiliano; Oomens, J. ; Berden, G. ; Angelis, Francesco De

2018, Article / Letter to editor (Chemistry : a European Journal, vol. 24, iss. 27, (2018), pp. 7026-7032)

Transition metal(II) complexes of histidine-containing tripeptides: Structures, and infrared spectroscopy by IRMPD

Dunbar, R.C.; Martens, J.K.; Berden, G. ; Oomens, J.

2018, Article / Letter to editor (International Journal of Mass Spectrometry, vol. 429, (2018), pp. 198-205)

Conformations and N-glycosidic bond stabilities of sodium cationized 2-deoxycytidine and cytidine: Solution conformation of [Cyd + Na](+) is preserved upon ESI

Zhu, Y.; Hamlow, L.A.; He, C.C.; Roy, H.A.; Cunningham, N.A.; Munshi, M.U.; Berden, G. ; Oomens, J. ; Rodgers, M.T.

2018, Article / Letter to editor (International Journal of Mass Spectrometry, vol. 429, (2018), pp. 18-27)

Dehydration reactions of protonated dipeptides containing asparagine or glutamine investigated by infrared ion spectroscopy

Kempkes, L.J.M.; Martens, J.K.; Berden, G. ; Oomens, J.

2018, Article / Letter to editor (International Journal of Mass Spectrometry, vol. 429, (2018), pp. 90-100)

Binding of Divalent Metal Ions with Deprotonated Peptides: Do Gas-Phase Anions Parallel the Condensed Phase?

Dunbar, R.C.; Martens, J.K.; Berden, G. ; Oomens, J.

2018, Article / Letter to editor (The Journal of Physical Chemistry A, vol. 122, iss. 25, (2018), pp. 5589-5596)

Competition between salt bridge and non-zwitterionic structures in deprotonated amino acid dimers

Heiles, S.; Berden, G. ; Oomens, J. ; Williams, E.R.

2018, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 20, iss. 23, (2018), pp. 15641-15652)

Structural Investigation of the Hormone Melatonin and Its Alkali and Alkaline Earth Metal Complexes in the Gas Phase

Chakrabarty, Satrajit; DiTucci, Matthew J.; Berden, G. ; Oomens, J. ; Williams, E.R.

2018, Article / Letter to editor (Journal of the American Society for Mass Spectrometry, vol. 29, iss. 9, (2018), pp. 1835-1847)

Experimental and theoretical investigations of infrared multiple photon dissociation spectra of arginine complexes with Zn2+ and Cd2+

Chalifoux, Aaron M.; Boles, G.C.; Berden, G. ; Oomens, J. ; Armentrout, P.B.

2018, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 20, iss. 31, (2018), pp. 20712-20725)

Loss of water from protonated polyglycines: interconversion and dissociation of the product imidazolone ions

Lam, K.H.Brian; Lau, J.K.C.; Lai, Cheuk-Kuen; Chu, Ivan K.; Martens, J.K.; Berden, G. ; Oomens, J. ; Hopkinson, A.C.; Siu, K.W.M.

2018, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 20, iss. 27, (2018), pp. 18688-18698)

Molecular identification in metabolomics using infrared ion spectroscopy

Martens, J.K.; Berden, G. ; Outersterp, R.E. van; Kluijtmans, L.A.J; Engelke, U.F.H; Karnebeek, C.D; Oomens, J.

2017, Article / Letter to editor (Scientific Reports, vol. 7, iss. 1, (2017), article 3363)

Facile pentagon formation in the dissociation of polyaromatics

Haas, A.J. de; Oomens, J. ; Bouwman, J.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 4, (2017), pp. 2974-2980)

Irmpd Spectroscopy Sheds New (Infrared) Light on the Sulfate Pattern of Carbohydrates

Schindler, B.; Barnes, L.; Gray, C.J.; Chambert, S.; Flitsch, S.L.; Oomens, J. ; Daniel, R.; Allouche, A.R.; Compagnon, I.

2017, Article / Letter to editor (The Journal of Physical Chemistry A, vol. 121, iss. 10, (2017), pp. 2114-2120)

Infrared multiple-photon dissociation action spectroscopy of the b(2)(+) ion from PPG: Evidence of third residue affecting b(2)(+) fragment structure

Poutsma, J.C.; Martens, J.K.; Oomens, J. ; Maitre, P.; Steinmetz, V.; Bernier, M.; Jia, M.X.; Wysocki, V.

2017, Article / Letter to editor (Journal of the American Society for Mass Spectrometry, vol. 28, iss. 7, (2017), pp. 1482-1488)

Water microsolvation can switch the binding mode of Ni(II) with small peptides

Dunbar, R.C.; Martens, Jonathan; Berden, G. ; Oomens, J.

2017, Article / Letter to editor (Journal of Physical Chemistry Letters, vol. 8, iss. 12, (2017), pp. 2634-2638)

Hydrogen tunneling above room temperature evidenced by infrared ion spectroscopy

Schäfer, M.; Peckelsen, K.; Paul, M.; Martens, Jonathan; Oomens, J. ; Berden, G. ; Berkessel, A.; Meijer, A.J.H.M.

2017, Article / Letter to editor (Journal of the American Chemical Society, vol. 139, iss. 16, (2017), pp. 5779-5786)

Isolated alkali cation complexes of the antibiotic ionophore nonactin: Correlation with crystalline structures

Aviles-Moreno, J.R.; Gamez, F.; Berden, G. ; Oomens, J. ; Martinez-Haya, B.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 23, (2017), pp. 14984-14991)

Benchmark Ditopic Binding of Cl- and Cs+ by the Macrocycle Hexacyclen

Aviles-Moreno, J.R.; Berden, G. ; Oomens, J. ; Martinez-Haya, B.

2017, Article / Letter to editor (Chemphyschem, vol. 18, iss. 10, (2017), pp. 1324-1332)

N3 and O2 protonated conformers of the cytosine mononucleotides coexist in the gas phase

Wu, R.R.; Hamlow, L.A.; He, C.C.; Nei, Y.w.; Berden, G. ; Oomens, J. ; Rodgers, M.T.

2017, Article / Letter to editor (Journal of the American Society for Mass Spectrometry, vol. 28, iss. 8, (2017), pp. 1638-1646)

Structure and dissociation pathways of protonated tetralin (1,2,3,4-tetrahydronaphthalene)

Vala, M.; Oomens, J. ; Berden, G.

2017, Article / Letter to editor (The Journal of Physical Chemistry A, vol. 121, iss. 24, (2017), pp. 4606-4612)

Effects of sodium cationization versus protonation on the conformations and N-glycosidic bond stabilities of sodium cationized Urd and dUrd: Solution conformation of [Urd+Na]+ is preserved upon ESI

Zhu, Y.; Roy, H.A.; Cunningham, N.A.; Strobehn, S.F.; Gao, J.; Munshi, M.U.; Berden, G. ; Oomens, J. ; Rodgers, M.T.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 27, (2017), pp. 17637-17652)

Correction: Zn2+ and cd2+ cationized serine complexes: Infrared multiple photon dissociation spectroscopy and density functional theory investigations (vol 18, pg 22434, 2016)

Coates, R.A.; Boles, G.C.; McNary, C.P.; Berden, G. ; Oomens, J. ; Armentrout, P.B.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 27, (2017), pp. 18100-18101)

The intrinsic basicity of the phosphate backbone exceeds that of uracil and thymine residues: protonation of the phosphate moiety is preferred over the nucleobase for pdThd and pUrd

Wu, R.R.; Hamlow, L.A.; He, C.C.; Nei, Y.w.; Berden, G. ; Oomens, J. ; Rodgers, M.T.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 45, (2017), pp. 30351-30361)

Cleaving Off Uranyl Oxygens through Chelation: A Mechanistic Study in the Gas Phase

Abergel, R.J.; Jong, W.A.; Deblonde, G.J.-P.; Dau, P.D.; Captain, I.; Eaton, T.M.; Martens, J.K.; Berden, G. ; Oomens, J. ; Gibson, J.K.

2017, Article / Letter to editor (Inorganic Chemistry, vol. 56, iss. 21, (2017), pp. 12930-12937)

Hydrogen Liberation from Gaseous 2-Bora-1,3-diazacycloalkanium Cations.

Bendo, J.A.; Martens, J.K.; Berden, G. ; Oomens, J. ; Morton, T.H.

2017, Article / Letter to editor (The Journal of Physical Chemistry A, vol. 121, iss. 41, (2017), pp. 7910-7916)

Influence of Transition Metal Cationization versus Sodium Cationization and Protonation on the Gas-Phase Tautomeric Conformations and Stability of Uracil: Application to [Ura+Cu](+) and [Ura+Ag]().

Akinyemi, T.E.; Wu, R.R.; Nei, Y.w.; Cunningham, N.A.; Roy, H.A.; Steill, J.D.; Berden, G. ; Oomens, J. ; Rodgers, M.T.

2017, Article / Letter to editor (Journal of the American Society for Mass Spectrometry, vol. 28, iss. 11, (2017), pp. 2438-2453)

Experimental and Theoretical Investigations of Infrared Multiple Photon Dissociation Spectra of Glutamine Complexes with Zn2+ and Cd2+

Boles, G.C.; Coates, R.A.; Berden, G. ; Oomens, J. ; Armentrout, P.B.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 35, (2017), pp. 12394-12406)

Gas-phase Conformations and N-Glycosidic Bond Stabilities of Sodium Cationized 2′-Deoxyguanosine and Guanosine: Sodium Cations Preferentially Bind to the Guanine Residue

Zhu, Y.; Hamlow, L.A.; He, C.; Lee, J.K.; Gao, J.; Berden, G. ; Oomens, J. ; Rodgers, M.T.

2017, Article / Letter to editor (Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, (2017), pp. 1-41)

Revealing disparate chemistries of protactinium and uranium. Synthesis of the molecular uranium tetroxide anion, UO4–

de Jong, W.A.; Dau, P.D.; Wilson, R.E.; Marçalo, J.; Van Stipdonk, M.J.; Corcovilos, T.A.; Berden, G. ; Martens, J.K.; Oomens, J. ; Gibson, J.K.

2017, Article / Letter to editor (Inorganic Chemistry, vol. 56, iss. 6, (2017), pp. 3686-3694)

Correction: structural characterization of gas-phase cysteine and cysteine methyl ester complexes with zinc and cadmium dications by infrared multiple photon dissociation spectroscopy (vol 17, pg 25799, 2015)

Coates, R.A.; McNary, C.P.; Boles, G.C.; Berden, G. ; Oomens, J. ; Armentrout, P.B.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 28, (2017), pp. 18777-18778)

Gas-phase conformations and N-glycosidic bond stabilities of sodium cationized 2 '-deoxyguanosine and guanosine: Sodium cations preferentially bind to the guanine residue

Zhu, Y.; Hamlow, L.A.; He, C.C.; Lee, J.K.; Gao, J.; Berden, G. ; Oomens, J. ; Rodgers, M.T.

2017, Article / Letter to editor (Journal of Physical Chemistry B: Condensed Matter, Materials, Surfaces, Interfaces and Biophysical, vol. 121, iss. 16, (2017), pp. 4048-4060)

Gas-phase vibrational spectroscopy of triphenylamine: The effect of charge on structure and spectra

Munshi, M.U.; Berden, G. ; Martens, J.K.; Oomens, J.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 30, (2017), pp. 19881-19889)

Probing the geometry reorganization from solution to gas-phase in putrescine derivatives by IRMPD, H-1-NMR and theoretical calculations

Correra, T.C.; Fernandes, A.S.; Reginato, M.M.; Ducati, L.C.; Berden, G. ; Oomens, J.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 35, (2017), pp. 24330-24340)

Isolated complexes of the amino acid arginine with polyether and polyamine macrocycles, the role of proton transfer

Aviles-Moreno, J.R.; Berden, G. ; Oomens, J. ; Martinez-Haya, B.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 46, (2017), pp. 31345-31351)

Molecular identification in metabolomics using infrared ion spectroscopy

Martens, J.K.; Berden, G. ; Outersterp, R.E. van; Kluijtmans, L.A.J. ; Engelke, U.F.H. ; Karnebeek, C.D; Wevers, R.A. ; Oomens, J.

2017, Article / Letter to editor (Scientific Reports, vol. 7, iss. 1, (2017), article 3363)

Ergothioneine and related histidine derivatives in the gas phase: Tautomer structures determined by IRMPD spectroscopy and theory

Peckelsen, K.; Martens, J.K.; Czympiel, L.; Oomens, J. ; Berden, G. ; Grundemann, D.; Meijer, A.J.H.M.; Schafer, M.

2017, Article / Letter to editor (PCCP Physical Chemistry Chemical Physics, vol. 19, iss. 34, (2017), pp. 23362-23372)

Combined liquid chromatography-infrared ion spectroscopy for identification of regioisomeric drug metabolites

Martens, Jonathan; Koppen, V.; Berden, G. ; Cuyckens, F.; Oomens, J.

2017, Article / Letter to editor (Analytical Chemistry, vol. 89, iss. 8, (2017), pp. 4359-4362)

Preparation of labile Ni+(cyclam) cations in the gas phase using electron-transfer reduction through ion–ion recombination in an ion trap and structural characterization with vibrational spectroscopy

Munshi, M.U.; Craig, S.M.; Berden, G. ; Martens, J.K.; DeBlase, A.F.; Foreman, D.J.; McLuckey, S.A.; Oomens, J. ; Johnson, M.A.

2017, Article / Letter to editor (Journal of Physical Chemistry Letters, vol. 8, iss. 20, (2017), pp. 5047-5052)

Gas-phase complexes of Ni2+ and Ca2+ with deprotonated histidylhistidine (HisHis): A model case for polyhistidyl-metal binding motifs

Peckelsen, K.; Martens, J.K.; Berden, G. ; Oomens, J. ; Dunbar, R.C.; Meijer, A.J.H.M.; Schäfer, M.

2017, Article / Letter to editor (Journal of Molecular Spectroscopy, vol. 332, (2017), pp. 38-44)

Intramolecular proton transfer from one ether oxygen to another

Oomens, J. ; Berden, G. ; Martens, J.K.; Morton, T.H.

2017, Article / Letter to editor (International Journal of Mass Spectrometry, vol. 418, (2017), pp. 188-192)

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